diff --git a/automation/bulk_joomla_template.php b/automation/bulk_joomla_template.php
index 391c8d8..60e2a7c 100644
--- a/automation/bulk_joomla_template.php
+++ b/automation/bulk_joomla_template.php
@@ -15,11 +15,11 @@
  * BRIEF: Bulk scaffold and sync Joomla template repositories
  *
  * USAGE
- *   php api/automation/bulk_joomla_template.php --scaffold --name=MokoTheme
- *   php api/automation/bulk_joomla_template.php --scaffold --name=MokoTheme --client=administrator
- *   php api/automation/bulk_joomla_template.php --sync --repos=MokoTheme,MokoDarkTheme
- *   php api/automation/bulk_joomla_template.php --sync --all
- *   php api/automation/bulk_joomla_template.php --list
+ *   php automation/bulk_joomla_template.php --scaffold --name=MokoTheme
+ *   php automation/bulk_joomla_template.php --scaffold --name=MokoTheme --client=administrator
+ *   php automation/bulk_joomla_template.php --sync --repos=MokoTheme,MokoDarkTheme
+ *   php automation/bulk_joomla_template.php --sync --all
+ *   php automation/bulk_joomla_template.php --list
  */
 
 declare(strict_types=1);
@@ -723,7 +723,7 @@ class BulkJoomlaTemplate extends CLIApp
 	 * and pushes the newer one to the stale platform.
 	 *
 	 * Designed to be called from a CI workflow via:
-	 *   php api/automation/bulk_joomla_template.php --sync-updates --repos=MokoCassiopeia
+	 *   php automation/bulk_joomla_template.php --sync-updates --repos=MokoCassiopeia
 	 */
 	private function syncUpdatesBetweenPlatforms(string $org): int
 	{
diff --git a/automation/bulk_sync.php b/automation/bulk_sync.php
index 90aeba0..ff525fc 100755
--- a/automation/bulk_sync.php
+++ b/automation/bulk_sync.php
@@ -420,7 +420,7 @@ class BulkSync extends CLIApp
                 $this->log("The bulk repository sync is failing silently because the core", 'ERROR');
                 $this->log("synchronization logic has not been implemented yet.", 'ERROR');
                 $this->log("", 'ERROR');
-                $this->log("Location: api/lib/Enterprise/RepositorySynchronizer.php", 'ERROR');
+                $this->log("Location: lib/Enterprise/RepositorySynchronizer.php", 'ERROR');
                 $this->log("Method: processRepository()", 'ERROR');
                 $this->log("", 'ERROR');
                 $this->log("Required Implementation:", 'ERROR');
@@ -509,7 +509,7 @@ class BulkSync extends CLIApp
             ]);
             $script = basename(__FILE__);
             $this->log("💾 Checkpoint saved. To resume once the issue is resolved, run:", 'INFO');
-            $this->log("   php api/automation/{$script} --resume [same flags as before]", 'INFO');
+            $this->log("   php automation/{$script} --resume [same flags as before]", 'INFO');
         } catch (\Exception $e) {
             $this->log("⚠️  Failed to save interrupt checkpoint: " . $e->getMessage(), 'WARN');
         }
@@ -1355,7 +1355,7 @@ class BulkSync extends CLIApp
 
         1. Check the local audit log or re-run with `--repos=<repo>` to see the specific error.
         2. Fix the underlying issue (API token, rate limit, branch protection, etc.).
-        3. Re-run: `php api/automation/bulk_sync.php --org={$org} --repos=<repo> --force --yes`
+        3. Re-run: `php automation/bulk_sync.php --org={$org} --repos=<repo> --force --yes`
         4. Close this issue once all repos are synced successfully.
 
         ---
diff --git a/automation/migrate_to_gitea.php b/automation/migrate_to_gitea.php
index 6c9f24d..f0ab6b0 100644
--- a/automation/migrate_to_gitea.php
+++ b/automation/migrate_to_gitea.php
@@ -15,10 +15,10 @@
  * BRIEF: Migrate repositories from GitHub to self-hosted Gitea instance
  *
  * USAGE
- *   php api/automation/migrate_to_gitea.php --dry-run
- *   php api/automation/migrate_to_gitea.php --repos MokoCRM MokoDoliMods
- *   php api/automation/migrate_to_gitea.php --exclude MokoStandards --skip-archived
- *   php api/automation/migrate_to_gitea.php --resume
+ *   php automation/migrate_to_gitea.php --dry-run
+ *   php automation/migrate_to_gitea.php --repos MokoCRM MokoDoliMods
+ *   php automation/migrate_to_gitea.php --exclude MokoStandards --skip-archived
+ *   php automation/migrate_to_gitea.php --resume
  */
 
 declare(strict_types=1);
diff --git a/automation/push_files.php b/automation/push_files.php
index 8555ec3..2c671b9 100644
--- a/automation/push_files.php
+++ b/automation/push_files.php
@@ -590,7 +590,7 @@ class PushFiles extends CLIApp
 
         1. Check the output above for the specific error per repo.
         2. Fix the underlying issue (API token, branch permissions, file path, etc.).
-        3. Re-run: `php api/automation/push_files.php --org={$org} --repos=<repo> --files=<files> --yes`
+        3. Re-run: `php automation/push_files.php --org={$org} --repos=<repo> --files=<files> --yes`
         4. Close this issue once resolved.
 
         ---
diff --git a/cli/archive_repo.php b/cli/archive_repo.php
index e210332..698955a 100644
--- a/cli/archive_repo.php
+++ b/cli/archive_repo.php
@@ -15,9 +15,9 @@
  * BRIEF: Gracefully retire a governed repository — archive, close issues/PRs, remove sync def
  *
  * USAGE
- *   php api/cli/archive_repo.php --repo MokoOldModule
- *   php api/cli/archive_repo.php --repo MokoOldModule --dry-run
- *   php api/cli/archive_repo.php --repo MokoOldModule --skip-close    # Archive only, keep issues open
+ *   php cli/archive_repo.php --repo MokoOldModule
+ *   php cli/archive_repo.php --repo MokoOldModule --dry-run
+ *   php cli/archive_repo.php --repo MokoOldModule --skip-close    # Archive only, keep issues open
  */
 
 declare(strict_types=1);
diff --git a/cli/create_project.php b/cli/create_project.php
index 85d6e5e..ae4bb9d 100644
--- a/cli/create_project.php
+++ b/cli/create_project.php
@@ -15,10 +15,10 @@
  * BRIEF: Create baseline GitHub Projects for repositories with standard fields and views
  *
  * USAGE
- *   php api/cli/create_project.php --repo MokoCRM                    # Auto-detect type, create project
- *   php api/cli/create_project.php --repo MokoCRM --type dolibarr    # Force type
- *   php api/cli/create_project.php --org mokoconsulting-tech --all    # All repos without projects
- *   php api/cli/create_project.php --repo MokoCRM --dry-run          # Preview without changes
+ *   php cli/create_project.php --repo MokoCRM                    # Auto-detect type, create project
+ *   php cli/create_project.php --repo MokoCRM --type dolibarr    # Force type
+ *   php cli/create_project.php --org mokoconsulting-tech --all    # All repos without projects
+ *   php cli/create_project.php --repo MokoCRM --dry-run          # Preview without changes
  */
 
 declare(strict_types=1);
@@ -385,7 +385,7 @@ function createProject(
 			updateProjectV2(input: {
 				projectId: $projectId,
 				shortDescription: $shortDescription,
-				readme: "Managed by MokoStandards. Run `php api/cli/create_project.php` to regenerate."
+				readme: "Managed by MokoStandards. Run `php cli/create_project.php` to regenerate."
 			}) {
 				projectV2 { id }
 			}
diff --git a/cli/create_repo.php b/cli/create_repo.php
index 5e59bda..2812d80 100644
--- a/cli/create_repo.php
+++ b/cli/create_repo.php
@@ -15,9 +15,9 @@
  * BRIEF: Scaffold a new governed repository with full MokoStandards baseline
  *
  * USAGE
- *   php api/cli/create_repo.php --name MokoNewModule --type dolibarr --description "My new module"
- *   php api/cli/create_repo.php --name MokoNewModule --type joomla --private
- *   php api/cli/create_repo.php --name MokoNewModule --type generic --dry-run
+ *   php cli/create_repo.php --name MokoNewModule --type dolibarr --description "My new module"
+ *   php cli/create_repo.php --name MokoNewModule --type joomla --private
+ *   php cli/create_repo.php --name MokoNewModule --type generic --dry-run
  */
 
 declare(strict_types=1);
@@ -229,7 +229,7 @@ if (!$dryRun) {
 	if (file_exists($syncScript)) {
 		passthru("php " . escapeshellarg($syncScript) . " --repos " . escapeshellarg($name) . " --force --yes");
 	} else {
-		echo "  Run manually: php api/automation/bulk_sync.php --repos {$name} --force --yes\n";
+		echo "  Run manually: php automation/bulk_sync.php --repos {$name} --force --yes\n";
 	}
 } else {
 	echo "  (dry-run) would run initial sync\n";
@@ -242,7 +242,7 @@ if (!$dryRun) {
 	if (file_exists($projectScript)) {
 		passthru("php " . escapeshellarg($projectScript) . " --repo " . escapeshellarg($name) . " --type " . escapeshellarg($type));
 	} else {
-		echo "  Run manually: php api/cli/create_project.php --repo {$name} --type {$type}\n";
+		echo "  Run manually: php cli/create_project.php --repo {$name} --type {$type}\n";
 	}
 } else {
 	echo "  (dry-run) would create Project\n";
diff --git a/cli/joomla_release.php b/cli/joomla_release.php
index 3ceeb0a..487e29b 100644
--- a/cli/joomla_release.php
+++ b/cli/joomla_release.php
@@ -15,10 +15,10 @@
  * BRIEF: Joomla release pipeline — build ZIP+tar.gz, upload to GitHub Release, update updates.xml
  *
  * USAGE
- *   php api/cli/joomla_release.php --repo MokoCassiopeia --stability stable
- *   php api/cli/joomla_release.php --repo MokoCassiopeia --stability development
- *   php api/cli/joomla_release.php --repo MokoCassiopeia --stability rc --dry-run
- *   php api/cli/joomla_release.php --path /local/repo --stability stable
+ *   php cli/joomla_release.php --repo MokoCassiopeia --stability stable
+ *   php cli/joomla_release.php --repo MokoCassiopeia --stability development
+ *   php cli/joomla_release.php --repo MokoCassiopeia --stability rc --dry-run
+ *   php cli/joomla_release.php --path /local/repo --stability stable
  */
 
 declare(strict_types=1);
diff --git a/cli/release.php b/cli/release.php
index 05b29e1..0a0e7c2 100644
--- a/cli/release.php
+++ b/cli/release.php
@@ -13,10 +13,10 @@
  * BRIEF: Automate the MokoStandards version branch release flow
  *
  * USAGE
- *   php api/cli/release.php                    # Release current version
- *   php api/cli/release.php --bump minor       # Bump minor, then release
- *   php api/cli/release.php --bump major       # Bump major, then release
- *   php api/cli/release.php --dry-run          # Preview without changes
+ *   php cli/release.php                    # Release current version
+ *   php cli/release.php --bump minor       # Bump minor, then release
+ *   php cli/release.php --bump major       # Bump major, then release
+ *   php cli/release.php --dry-run          # Preview without changes
  */
 
 declare(strict_types=1);
@@ -30,7 +30,7 @@ foreach ($argv as $i => $arg) {
 }
 
 $repoRoot = dirname(__DIR__, 2);
-$syncFile = "{$repoRoot}/api/lib/Enterprise/RepositorySynchronizer.php";
+$syncFile = "{$repoRoot}/lib/Enterprise/RepositorySynchronizer.php";
 // Check both workflow directories for the bulk-repo-sync workflow
 $bulkSyncFile = file_exists("{$repoRoot}/.gitea/workflows/bulk-repo-sync.yml")
     ? "{$repoRoot}/.gitea/workflows/bulk-repo-sync.yml"
diff --git a/cli/sync_rulesets.php b/cli/sync_rulesets.php
index 47fdef6..6d1ab67 100644
--- a/cli/sync_rulesets.php
+++ b/cli/sync_rulesets.php
@@ -15,10 +15,10 @@
  * BRIEF: Apply branch protection rules to all repos via platform adapter
  *
  * USAGE
- *   php api/cli/sync_rulesets.php                         # Apply to all repos
- *   php api/cli/sync_rulesets.php --repo MokoCRM          # Single repo
- *   php api/cli/sync_rulesets.php --dry-run               # Preview only
- *   php api/cli/sync_rulesets.php --delete                # Remove then re-apply
+ *   php cli/sync_rulesets.php                         # Apply to all repos
+ *   php cli/sync_rulesets.php --repo MokoCRM          # Single repo
+ *   php cli/sync_rulesets.php --dry-run               # Preview only
+ *   php cli/sync_rulesets.php --delete                # Remove then re-apply
  *
  * NOTE: On GitHub, this creates rulesets via the rulesets API.
  *       On Gitea, this creates branch_protections via the branch protection API.
diff --git a/deploy/deploy-joomla.php b/deploy/deploy-joomla.php
index 88aed42..ef209b2 100644
--- a/deploy/deploy-joomla.php
+++ b/deploy/deploy-joomla.php
@@ -20,9 +20,9 @@
  * changes — only XML manifest changes require a Joomla reinstall.
  *
  * USAGE
- *   php api/deploy/deploy-joomla.php --path . --config /tmp/sftp-config.json
- *   php api/deploy/deploy-joomla.php --path . --config /tmp/sftp-config.json --dry-run
- *   php api/deploy/deploy-joomla.php --path . --env dev
+ *   php deploy/deploy-joomla.php --path . --config /tmp/sftp-config.json
+ *   php deploy/deploy-joomla.php --path . --config /tmp/sftp-config.json --dry-run
+ *   php deploy/deploy-joomla.php --path . --env dev
  */
 
 declare(strict_types=1);
diff --git a/deploy/deploy-sftp.php b/deploy/deploy-sftp.php
index c4b3f3f..2afff3e 100644
--- a/deploy/deploy-sftp.php
+++ b/deploy/deploy-sftp.php
@@ -96,25 +96,25 @@ CONFIG FORMAT
 
 EXAMPLES
   # Dry-run preview of dev deployment
-  php api/deploy/deploy-sftp.php --env dev --dry-run --verbose
+  php deploy/deploy-sftp.php --env dev --dry-run --verbose
 
   # Deploy to dev server
-  php api/deploy/deploy-sftp.php --path /repos/mymodule --env dev
+  php deploy/deploy-sftp.php --path /repos/mymodule --env dev
 
   # Deploy to release/production server
-  php api/deploy/deploy-sftp.php --path /repos/mymodule --env rs
+  php deploy/deploy-sftp.php --path /repos/mymodule --env rs
 
   # Use a different source directory
-  php api/deploy/deploy-sftp.php --env dev --src-dir htdocs
+  php deploy/deploy-sftp.php --env dev --src-dir htdocs
 
   # Explicit config with encrypted key
-  php api/deploy/deploy-sftp.php \
+  php deploy/deploy-sftp.php \
     --path /repos/mymodule \
     --env rs \
     --key-passphrase "my passphrase"
 
   # Quiet mode (errors only)
-  php api/deploy/deploy-sftp.php --env dev --quiet
+  php deploy/deploy-sftp.php --env dev --quiet
 
 EXIT CODES
   0  All files uploaded successfully
diff --git a/lib/CliBase.php b/lib/CliBase.php
index f3f4120..010cde0 100644
--- a/lib/CliBase.php
+++ b/lib/CliBase.php
@@ -11,7 +11,7 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /lib/CliBase.php
  * VERSION: 04.06.00
- * BRIEF: Standalone base CLI class for api/ scripts that do not use CliFramework
+ * BRIEF: Standalone base CLI class for scripts that do not use CliFramework
  */
 
 declare(strict_types=1);
diff --git a/lib/Common.php b/lib/Common.php
index d53adb7..52a803a 100644
--- a/lib/Common.php
+++ b/lib/Common.php
@@ -11,7 +11,7 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /lib/Common.php
  * VERSION: 04.06.00
- * BRIEF: Common utility functions for api/ scripts
+ * BRIEF: Common utility functions for scripts
  * NOTE: Version format used throughout is zero-padded semver: XX.YY.ZZ (e.g. 04.00.04).
  *       All version regex patterns enforce exactly two digits per component by design.
  */
diff --git a/lib/Enterprise/EnterpriseReadinessValidator.php b/lib/Enterprise/EnterpriseReadinessValidator.php
index 9dabf4b..3b360ae 100644
--- a/lib/Enterprise/EnterpriseReadinessValidator.php
+++ b/lib/Enterprise/EnterpriseReadinessValidator.php
@@ -92,7 +92,7 @@ class EnterpriseReadinessValidator
         ];
         
         foreach ($required as $library) {
-            $phpFile = "{$path}/api/lib/Enterprise/{$library}.php";
+            $phpFile = "{$path}/lib/Enterprise/{$library}.php";
             $this->addResult(
                 "Enterprise library: {$library}",
                 file_exists($phpFile),
diff --git a/lib/Enterprise/RepositorySynchronizer.php b/lib/Enterprise/RepositorySynchronizer.php
index 5633711..606c136 100644
--- a/lib/Enterprise/RepositorySynchronizer.php
+++ b/lib/Enterprise/RepositorySynchronizer.php
@@ -166,7 +166,7 @@ class RepositorySynchronizer
     {
         $this->logger->logInfo("Starting synchronization for {$org}/{$repo}");
 
-        // Resolve repo root (two levels up from this file: Enterprise/ → lib/ → api/ → root)
+        // Resolve repo root (three levels up from this file: Enterprise/ → lib/ → root)
         // API repo root (definitions, sync code)
         $repoRoot = dirname(dirname(__DIR__));
         // MokoStandards repo root (templates, configs)
diff --git a/maintenance/pin_action_shas.php b/maintenance/pin_action_shas.php
index bc3ef5d..e525d93 100644
--- a/maintenance/pin_action_shas.php
+++ b/maintenance/pin_action_shas.php
@@ -34,7 +34,7 @@ use MokoEnterprise\PlatformAdapterFactory;
  * pinned commit SHA.  Already-pinned references (40-char hex SHA) are left untouched.
  *
  * Usage:
- *   php api/maintenance/pin_action_shas.php [--dry-run] [--verbose] [--help]
+ *   php maintenance/pin_action_shas.php [--dry-run] [--verbose] [--help]
  *
  * Environment:
  *   GH_TOKEN       Personal access token for GitHub API calls.
@@ -90,7 +90,7 @@ class ActionShaPinner
     private function showHelp(): void
     {
         echo <<<'HELP'
-Usage: php api/maintenance/pin_action_shas.php [OPTIONS]
+Usage: php maintenance/pin_action_shas.php [OPTIONS]
 
 Pins GitHub Actions to immutable commit SHAs in all .github/workflows/*.yml
 files.  Already-pinned references (40-character commit SHA) are skipped.
@@ -106,10 +106,10 @@ Environment:
 
 Examples:
   # Preview all changes
-  GH_TOKEN=ghp_xxx php api/maintenance/pin_action_shas.php --dry-run --verbose
+  GH_TOKEN=ghp_xxx php maintenance/pin_action_shas.php --dry-run --verbose
 
   # Apply changes
-  GH_TOKEN=ghp_xxx php api/maintenance/pin_action_shas.php
+  GH_TOKEN=ghp_xxx php maintenance/pin_action_shas.php
 
 HELP;
     }
diff --git a/maintenance/repo_inventory.php b/maintenance/repo_inventory.php
index 86ffe48..16581d9 100644
--- a/maintenance/repo_inventory.php
+++ b/maintenance/repo_inventory.php
@@ -15,9 +15,9 @@
  * BRIEF: Generate a live inventory dashboard of all governed repos as a GitHub issue
  *
  * USAGE
- *   php api/maintenance/repo_inventory.php                    # Generate and post dashboard
- *   php api/maintenance/repo_inventory.php --dry-run          # Preview only
- *   php api/maintenance/repo_inventory.php --json             # JSON output to stdout
+ *   php maintenance/repo_inventory.php                    # Generate and post dashboard
+ *   php maintenance/repo_inventory.php --dry-run          # Preview only
+ *   php maintenance/repo_inventory.php --json             # JSON output to stdout
  */
 
 declare(strict_types=1);
diff --git a/maintenance/rotate_secrets.php b/maintenance/rotate_secrets.php
index 33af096..e0438a8 100644
--- a/maintenance/rotate_secrets.php
+++ b/maintenance/rotate_secrets.php
@@ -15,10 +15,10 @@
  * BRIEF: Audit FTP secrets and variables across all governed repos — report missing or stale
  *
  * USAGE
- *   php api/maintenance/rotate_secrets.php --all                  # Audit all repos
- *   php api/maintenance/rotate_secrets.php --repo MokoCRM         # Single repo
- *   php api/maintenance/rotate_secrets.php --all --json           # JSON output
- *   php api/maintenance/rotate_secrets.php --all --create-issue   # Post results as issue
+ *   php maintenance/rotate_secrets.php --all                  # Audit all repos
+ *   php maintenance/rotate_secrets.php --repo MokoCRM         # Single repo
+ *   php maintenance/rotate_secrets.php --all --json           # JSON output
+ *   php maintenance/rotate_secrets.php --all --create-issue   # Post results as issue
  */
 
 declare(strict_types=1);
diff --git a/maintenance/update_sha_hashes.php b/maintenance/update_sha_hashes.php
index e14c34b..9b45a73 100755
--- a/maintenance/update_sha_hashes.php
+++ b/maintenance/update_sha_hashes.php
@@ -25,7 +25,7 @@ declare(strict_types=1);
  */
 class ScriptRegistryUpdater
 {
-    private const REGISTRY_PATH = 'api/.script-registry.json';
+    private const REGISTRY_PATH = '.script-registry.json';
     
     private bool $dryRun = false;
     private bool $verbose = false;
diff --git a/maintenance/update_version_from_readme.php b/maintenance/update_version_from_readme.php
index 68d0bc9..f5118d4 100644
--- a/maintenance/update_version_from_readme.php
+++ b/maintenance/update_version_from_readme.php
@@ -435,15 +435,15 @@ class UpdateVersionFromReadme extends CliFramework
 			"",
 			"1. Run the sync script locally:",
 			"   ```bash",
-			"   php api/maintenance/update_version_from_readme.php --path . --dry-run",
-			"   php api/maintenance/update_version_from_readme.php --path .",
+			"   php maintenance/update_version_from_readme.php --path . --dry-run",
+			"   php maintenance/update_version_from_readme.php --path .",
 			"   ```",
 			"2. Inspect any files still flagged — they may use a non-standard VERSION format.",
 			"3. Update them manually to match `VERSION: {$version}`.",
 			"4. Commit and push — this issue will be closed automatically on the next successful sync.",
 			"",
 			"---",
-			"*Automatically created by [update_version_from_readme.php](api/maintenance/update_version_from_readme.php)*",
+			"*Automatically created by [update_version_from_readme.php](maintenance/update_version_from_readme.php)*",
 		]);
 
 		try {
diff --git a/validate/auto_detect_platform.php b/validate/auto_detect_platform.php
index 59d975b..49d04af 100755
--- a/validate/auto_detect_platform.php
+++ b/validate/auto_detect_platform.php
@@ -64,7 +64,7 @@ class AutoDetectPlatform extends CLIApp
     {
         return [
             'repo-path:' => 'Path to repository to analyze (default: current directory)',
-            'schema-dir:' => 'Path to schema definitions directory (default: api/definitions/default)',
+            'schema-dir:' => 'Path to schema definitions directory (default: definitions/default)',
             'output-dir:' => 'Directory for output reports (default: var/logs/validation)',
         ];
     }
diff --git a/validate/check_composer_deps.php b/validate/check_composer_deps.php
index ac46ff0..16d3058 100644
--- a/validate/check_composer_deps.php
+++ b/validate/check_composer_deps.php
@@ -15,9 +15,9 @@
  * BRIEF: Validate composer.json enterprise dependency across all governed repos
  *
  * USAGE
- *   php api/validate/check_composer_deps.php --repo MokoCRM                 # Single repo
- *   php api/validate/check_composer_deps.php --all                          # All repos
- *   php api/validate/check_composer_deps.php --all --json                   # JSON output
+ *   php validate/check_composer_deps.php --repo MokoCRM                 # Single repo
+ *   php validate/check_composer_deps.php --all                          # All repos
+ *   php validate/check_composer_deps.php --all --json                   # JSON output
  */
 
 declare(strict_types=1);
diff --git a/validate/check_enterprise_readiness.php b/validate/check_enterprise_readiness.php
index db04f1a..37e85db 100755
--- a/validate/check_enterprise_readiness.php
+++ b/validate/check_enterprise_readiness.php
@@ -139,18 +139,18 @@ class EnterpriseReadinessChecker extends CliFramework
     {
         $required = ['ApiClient', 'AuditLogger', 'Config', 'ErrorRecovery', 'MetricsCollector'];
 
-        // Enterprise libs may live in vendor/ (Composer install) or api/lib/Enterprise/ (MokoStandards itself).
+        // Enterprise libs may live in vendor/ (Composer install) or lib/Enterprise/ (MokoStandards itself).
         // A single vendor/ directory confirms the whole package is present — no need to check per-file.
         $vendorPkg = "{$path}/vendor/mokoconsulting-tech/enterprise";
         $inVendor  = is_dir($vendorPkg);
 
         foreach ($required as $library) {
-            $localFile = "{$path}/api/lib/Enterprise/{$library}.php";
+            $localFile = "{$path}/lib/Enterprise/{$library}.php";
             $found     = $inVendor || file_exists($localFile);
             $this->addResult(
                 "Enterprise library: {$library}",
                 $found,
-                "Missing enterprise library (not in vendor/mokoconsulting-tech/enterprise or api/lib/Enterprise/)"
+                "Missing enterprise library (not in vendor/mokoconsulting-tech/enterprise or lib/Enterprise/)"
             );
         }
     }
diff --git a/validate/check_version_consistency.php b/validate/check_version_consistency.php
index a1fc587..ec84389 100755
--- a/validate/check_version_consistency.php
+++ b/validate/check_version_consistency.php
@@ -144,7 +144,7 @@ class CheckVersionConsistency extends CliFramework
 		// ── Check PHP Enterprise library files ────────────────────────────────
 		$this->section('Checking PHP source files');
 
-		$phpFiles  = $this->findPhpFiles($path . '/api/lib/Enterprise');
+		$phpFiles  = $this->findPhpFiles($path . '/lib/Enterprise');
 		$phpTotal  = count($phpFiles);
 
 		foreach ($phpFiles as $i => $file) {
diff --git a/validate/scan_drift.php b/validate/scan_drift.php
index eb3f1d5..62e778e 100755
--- a/validate/scan_drift.php
+++ b/validate/scan_drift.php
@@ -529,7 +529,7 @@ class DriftScanner extends CliFramework
         $body .= "1. **Option 1:** Run bulk sync to update all files automatically\n";
         $body .= "   ```bash\n";
         $body .= "   # From MokoStandards repository\n";
-        $body .= "   php api/automation/bulk_sync.php --repos=\"{$repo}\"\n";
+        $body .= "   php automation/bulk_sync.php --repos=\"{$repo}\"\n";
         $body .= "   ```\n\n";
         $body .= "2. **Option 2:** If changes are intentional, update `.github/override.tf` to exclude files\n\n";
         $body .= "3. **Option 3:** Manually update files to match templates\n\n";
diff --git a/wrappers/auto_detect_platform.php b/wrappers/auto_detect_platform.php
index 9e94a59..b16dbfd 100644
--- a/wrappers/auto_detect_platform.php
+++ b/wrappers/auto_detect_platform.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/auto_detect_platform.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/auto_detect_platform.php
+ * BRIEF: PHP wrapper for validate/auto_detect_platform.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'auto_detect_platform';
-const SCRIPT_PATH     = 'api/validate/auto_detect_platform.php';
+const SCRIPT_PATH     = 'validate/auto_detect_platform.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/bulk_sync.php b/wrappers/bulk_sync.php
index c15903a..e62d9e6 100644
--- a/wrappers/bulk_sync.php
+++ b/wrappers/bulk_sync.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/bulk_sync.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/automation/bulk_sync.php
+ * BRIEF: PHP wrapper for automation/bulk_sync.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'bulk_sync';
-const SCRIPT_PATH     = 'api/automation/bulk_sync.php';
+const SCRIPT_PATH     = 'automation/bulk_sync.php';
 const SCRIPT_CATEGORY = 'automation';
 
 /**
diff --git a/wrappers/check_changelog.php b/wrappers/check_changelog.php
index 3291fe1..efd221a 100644
--- a/wrappers/check_changelog.php
+++ b/wrappers/check_changelog.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_changelog.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_changelog.php
+ * BRIEF: PHP wrapper for validate/check_changelog.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_changelog';
-const SCRIPT_PATH     = 'api/validate/check_changelog.php';
+const SCRIPT_PATH     = 'validate/check_changelog.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_dolibarr_module.php b/wrappers/check_dolibarr_module.php
index ba74cb2..9431f3d 100644
--- a/wrappers/check_dolibarr_module.php
+++ b/wrappers/check_dolibarr_module.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_dolibarr_module.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_dolibarr_module.php
+ * BRIEF: PHP wrapper for validate/check_dolibarr_module.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_dolibarr_module';
-const SCRIPT_PATH     = 'api/validate/check_dolibarr_module.php';
+const SCRIPT_PATH     = 'validate/check_dolibarr_module.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_enterprise_readiness.php b/wrappers/check_enterprise_readiness.php
index 46176b5..b206383 100644
--- a/wrappers/check_enterprise_readiness.php
+++ b/wrappers/check_enterprise_readiness.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_enterprise_readiness.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_enterprise_readiness.php
+ * BRIEF: PHP wrapper for validate/check_enterprise_readiness.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_enterprise_readiness';
-const SCRIPT_PATH     = 'api/validate/check_enterprise_readiness.php';
+const SCRIPT_PATH     = 'validate/check_enterprise_readiness.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_joomla_manifest.php b/wrappers/check_joomla_manifest.php
index fa37d97..bc9e601 100644
--- a/wrappers/check_joomla_manifest.php
+++ b/wrappers/check_joomla_manifest.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_joomla_manifest.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_joomla_manifest.php
+ * BRIEF: PHP wrapper for validate/check_joomla_manifest.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_joomla_manifest';
-const SCRIPT_PATH     = 'api/validate/check_joomla_manifest.php';
+const SCRIPT_PATH     = 'validate/check_joomla_manifest.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_language_structure.php b/wrappers/check_language_structure.php
index 535c30c..dfdf329 100644
--- a/wrappers/check_language_structure.php
+++ b/wrappers/check_language_structure.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_language_structure.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_language_structure.php
+ * BRIEF: PHP wrapper for validate/check_language_structure.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_language_structure';
-const SCRIPT_PATH     = 'api/validate/check_language_structure.php';
+const SCRIPT_PATH     = 'validate/check_language_structure.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_license_headers.php b/wrappers/check_license_headers.php
index 0994081..54fd842 100644
--- a/wrappers/check_license_headers.php
+++ b/wrappers/check_license_headers.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_license_headers.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_license_headers.php
+ * BRIEF: PHP wrapper for validate/check_license_headers.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_license_headers';
-const SCRIPT_PATH     = 'api/validate/check_license_headers.php';
+const SCRIPT_PATH     = 'validate/check_license_headers.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_no_secrets.php b/wrappers/check_no_secrets.php
index 333fe24..edac90d 100644
--- a/wrappers/check_no_secrets.php
+++ b/wrappers/check_no_secrets.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_no_secrets.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_no_secrets.php
+ * BRIEF: PHP wrapper for validate/check_no_secrets.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_no_secrets';
-const SCRIPT_PATH     = 'api/validate/check_no_secrets.php';
+const SCRIPT_PATH     = 'validate/check_no_secrets.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_paths.php b/wrappers/check_paths.php
index 45496d0..7bad72e 100644
--- a/wrappers/check_paths.php
+++ b/wrappers/check_paths.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_paths.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_paths.php
+ * BRIEF: PHP wrapper for validate/check_paths.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_paths';
-const SCRIPT_PATH     = 'api/validate/check_paths.php';
+const SCRIPT_PATH     = 'validate/check_paths.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_php_syntax.php b/wrappers/check_php_syntax.php
index e6caf0d..3025501 100644
--- a/wrappers/check_php_syntax.php
+++ b/wrappers/check_php_syntax.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_php_syntax.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_php_syntax.php
+ * BRIEF: PHP wrapper for validate/check_php_syntax.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_php_syntax';
-const SCRIPT_PATH     = 'api/validate/check_php_syntax.php';
+const SCRIPT_PATH     = 'validate/check_php_syntax.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_repo_health.php b/wrappers/check_repo_health.php
index adef046..82a47d5 100644
--- a/wrappers/check_repo_health.php
+++ b/wrappers/check_repo_health.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_repo_health.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_repo_health.php
+ * BRIEF: PHP wrapper for validate/check_repo_health.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_repo_health';
-const SCRIPT_PATH     = 'api/validate/check_repo_health.php';
+const SCRIPT_PATH     = 'validate/check_repo_health.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_structure.php b/wrappers/check_structure.php
index 0fd7271..40552e6 100644
--- a/wrappers/check_structure.php
+++ b/wrappers/check_structure.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_structure.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_structure.php
+ * BRIEF: PHP wrapper for validate/check_structure.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_structure';
-const SCRIPT_PATH     = 'api/validate/check_structure.php';
+const SCRIPT_PATH     = 'validate/check_structure.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_tabs.php b/wrappers/check_tabs.php
index b6d5577..95a62ab 100644
--- a/wrappers/check_tabs.php
+++ b/wrappers/check_tabs.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_tabs.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_tabs.php
+ * BRIEF: PHP wrapper for validate/check_tabs.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_tabs';
-const SCRIPT_PATH     = 'api/validate/check_tabs.php';
+const SCRIPT_PATH     = 'validate/check_tabs.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_version_consistency.php b/wrappers/check_version_consistency.php
index ff0e327..f67f067 100644
--- a/wrappers/check_version_consistency.php
+++ b/wrappers/check_version_consistency.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_version_consistency.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_version_consistency.php
+ * BRIEF: PHP wrapper for validate/check_version_consistency.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_version_consistency';
-const SCRIPT_PATH     = 'api/validate/check_version_consistency.php';
+const SCRIPT_PATH     = 'validate/check_version_consistency.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/check_xml_wellformed.php b/wrappers/check_xml_wellformed.php
index ee6c4e5..53306b0 100644
--- a/wrappers/check_xml_wellformed.php
+++ b/wrappers/check_xml_wellformed.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/check_xml_wellformed.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/check_xml_wellformed.php
+ * BRIEF: PHP wrapper for validate/check_xml_wellformed.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'check_xml_wellformed';
-const SCRIPT_PATH     = 'api/validate/check_xml_wellformed.php';
+const SCRIPT_PATH     = 'validate/check_xml_wellformed.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/deploy_sftp.php b/wrappers/deploy_sftp.php
index 44352de..b947bda 100644
--- a/wrappers/deploy_sftp.php
+++ b/wrappers/deploy_sftp.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/deploy_sftp.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/deploy/deploy-sftp.php
+ * BRIEF: PHP wrapper for deploy/deploy-sftp.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'deploy_sftp';
-const SCRIPT_PATH     = 'api/deploy/deploy-sftp.php';
+const SCRIPT_PATH     = 'deploy/deploy-sftp.php';
 const SCRIPT_CATEGORY = 'deploy';
 
 /**
diff --git a/wrappers/fix_line_endings.php b/wrappers/fix_line_endings.php
index ec8876b..5eac189 100644
--- a/wrappers/fix_line_endings.php
+++ b/wrappers/fix_line_endings.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/fix_line_endings.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/fix/fix_line_endings.php
+ * BRIEF: PHP wrapper for fix/fix_line_endings.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'fix_line_endings';
-const SCRIPT_PATH     = 'api/fix/fix_line_endings.php';
+const SCRIPT_PATH     = 'fix/fix_line_endings.php';
 const SCRIPT_CATEGORY = 'fix';
 
 /**
diff --git a/wrappers/fix_permissions.php b/wrappers/fix_permissions.php
index ec8109a..dc77868 100644
--- a/wrappers/fix_permissions.php
+++ b/wrappers/fix_permissions.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/fix_permissions.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/fix/fix_permissions.php
+ * BRIEF: PHP wrapper for fix/fix_permissions.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'fix_permissions';
-const SCRIPT_PATH     = 'api/fix/fix_permissions.php';
+const SCRIPT_PATH     = 'fix/fix_permissions.php';
 const SCRIPT_CATEGORY = 'fix';
 
 /**
diff --git a/wrappers/fix_tabs.php b/wrappers/fix_tabs.php
index 847ab5a..0864532 100644
--- a/wrappers/fix_tabs.php
+++ b/wrappers/fix_tabs.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/fix_tabs.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/fix/fix_tabs.php
+ * BRIEF: PHP wrapper for fix/fix_tabs.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'fix_tabs';
-const SCRIPT_PATH     = 'api/fix/fix_tabs.php';
+const SCRIPT_PATH     = 'fix/fix_tabs.php';
 const SCRIPT_CATEGORY = 'fix';
 
 /**
diff --git a/wrappers/fix_trailing_spaces.php b/wrappers/fix_trailing_spaces.php
index b3247af..aba8cb3 100644
--- a/wrappers/fix_trailing_spaces.php
+++ b/wrappers/fix_trailing_spaces.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/fix_trailing_spaces.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/fix/fix_trailing_spaces.php
+ * BRIEF: PHP wrapper for fix/fix_trailing_spaces.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'fix_trailing_spaces';
-const SCRIPT_PATH     = 'api/fix/fix_trailing_spaces.php';
+const SCRIPT_PATH     = 'fix/fix_trailing_spaces.php';
 const SCRIPT_CATEGORY = 'fix';
 
 /**
diff --git a/wrappers/gen_wrappers.php b/wrappers/gen_wrappers.php
index fb5458c..48a8645 100644
--- a/wrappers/gen_wrappers.php
+++ b/wrappers/gen_wrappers.php
@@ -12,7 +12,7 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/gen_wrappers.php
  * VERSION: 04.06.00
- * BRIEF: Generate PHP CLI wrapper scripts for every PHP script in api/
+ * BRIEF: Generate PHP CLI wrapper scripts for every PHP script in the repo
  */
 
 declare(strict_types=1);
@@ -24,43 +24,43 @@ declare(strict_types=1);
  */
 const SCRIPTS = [
 	// validate
-	'auto_detect_platform'       => ['api/validate/auto_detect_platform.php',          'validate'],
-	'check_changelog'            => ['api/validate/check_changelog.php',               'validate'],
-	'check_dolibarr_module'      => ['api/validate/check_dolibarr_module.php',         'validate'],
-	'check_enterprise_readiness' => ['api/validate/check_enterprise_readiness.php',    'validate'],
-	'check_joomla_manifest'      => ['api/validate/check_joomla_manifest.php',         'validate'],
-	'check_language_structure'   => ['api/validate/check_language_structure.php',      'validate'],
-	'check_license_headers'      => ['api/validate/check_license_headers.php',         'validate'],
-	'check_no_secrets'           => ['api/validate/check_no_secrets.php',              'validate'],
-	'check_paths'                => ['api/validate/check_paths.php',                   'validate'],
-	'check_php_syntax'           => ['api/validate/check_php_syntax.php',              'validate'],
-	'check_repo_health'          => ['api/validate/check_repo_health.php',             'validate'],
-	'check_structure'            => ['api/validate/check_structure.php',               'validate'],
-	'check_tabs'                 => ['api/validate/check_tabs.php',                    'validate'],
-	'check_version_consistency'  => ['api/validate/check_version_consistency.php',     'validate'],
-	'check_xml_wellformed'       => ['api/validate/check_xml_wellformed.php',          'validate'],
-	'scan_drift'                 => ['api/validate/scan_drift.php',                    'validate'],
+	'auto_detect_platform'       => ['validate/auto_detect_platform.php',          'validate'],
+	'check_changelog'            => ['validate/check_changelog.php',               'validate'],
+	'check_dolibarr_module'      => ['validate/check_dolibarr_module.php',         'validate'],
+	'check_enterprise_readiness' => ['validate/check_enterprise_readiness.php',    'validate'],
+	'check_joomla_manifest'      => ['validate/check_joomla_manifest.php',         'validate'],
+	'check_language_structure'   => ['validate/check_language_structure.php',      'validate'],
+	'check_license_headers'      => ['validate/check_license_headers.php',         'validate'],
+	'check_no_secrets'           => ['validate/check_no_secrets.php',              'validate'],
+	'check_paths'                => ['validate/check_paths.php',                   'validate'],
+	'check_php_syntax'           => ['validate/check_php_syntax.php',              'validate'],
+	'check_repo_health'          => ['validate/check_repo_health.php',             'validate'],
+	'check_structure'            => ['validate/check_structure.php',               'validate'],
+	'check_tabs'                 => ['validate/check_tabs.php',                    'validate'],
+	'check_version_consistency'  => ['validate/check_version_consistency.php',     'validate'],
+	'check_xml_wellformed'       => ['validate/check_xml_wellformed.php',          'validate'],
+	'scan_drift'                 => ['validate/scan_drift.php',                    'validate'],
 	// automation
-	'bulk_sync'                  => ['api/automation/bulk_sync.php',                   'automation'],
+	'bulk_sync'                  => ['automation/bulk_sync.php',                   'automation'],
 	// deploy
-	'deploy_sftp'                => ['api/deploy/deploy-sftp.php',                     'deploy'],
+	'deploy_sftp'                => ['deploy/deploy-sftp.php',                     'deploy'],
 	// fix
-	'fix_line_endings'           => ['api/fix/fix_line_endings.php',                   'fix'],
-	'fix_permissions'            => ['api/fix/fix_permissions.php',                    'fix'],
-	'fix_tabs'                   => ['api/fix/fix_tabs.php',                           'fix'],
-	'fix_trailing_spaces'        => ['api/fix/fix_trailing_spaces.php',                'fix'],
+	'fix_line_endings'           => ['fix/fix_line_endings.php',                   'fix'],
+	'fix_permissions'            => ['fix/fix_permissions.php',                    'fix'],
+	'fix_tabs'                   => ['fix/fix_tabs.php',                           'fix'],
+	'fix_trailing_spaces'        => ['fix/fix_trailing_spaces.php',                'fix'],
 	// maintenance
-	'pin_action_shas'            => ['api/maintenance/pin_action_shas.php',            'maintenance'],
-	'setup_labels'               => ['api/maintenance/setup_labels.php',               'maintenance'],
-	'sync_dolibarr_readmes'      => ['api/maintenance/sync_dolibarr_readmes.php',      'maintenance'],
-	'update_sha_hashes'          => ['api/maintenance/update_sha_hashes.php',          'maintenance'],
-	'update_version_from_readme' => ['api/maintenance/update_version_from_readme.php', 'maintenance'],
+	'pin_action_shas'            => ['maintenance/pin_action_shas.php',            'maintenance'],
+	'setup_labels'               => ['maintenance/setup_labels.php',               'maintenance'],
+	'sync_dolibarr_readmes'      => ['maintenance/sync_dolibarr_readmes.php',      'maintenance'],
+	'update_sha_hashes'          => ['maintenance/update_sha_hashes.php',          'maintenance'],
+	'update_version_from_readme' => ['maintenance/update_version_from_readme.php', 'maintenance'],
 	// plugin
-	'plugin_health_check'        => ['api/plugin_health_check.php',                    'plugin'],
-	'plugin_list'                => ['api/plugin_list.php',                            'plugin'],
-	'plugin_metrics'             => ['api/plugin_metrics.php',                         'plugin'],
-	'plugin_readiness'           => ['api/plugin_readiness.php',                       'plugin'],
-	'plugin_validate'            => ['api/plugin_validate.php',                        'plugin'],
+	'plugin_health_check'        => ['plugin_health_check.php',                    'plugin'],
+	'plugin_list'                => ['plugin_list.php',                            'plugin'],
+	'plugin_metrics'             => ['plugin_metrics.php',                         'plugin'],
+	'plugin_readiness'           => ['plugin_readiness.php',                       'plugin'],
+	'plugin_validate'            => ['plugin_validate.php',                        'plugin'],
 ];
 
 /**
diff --git a/wrappers/pin_action_shas.php b/wrappers/pin_action_shas.php
index ac524a3..59e85a7 100644
--- a/wrappers/pin_action_shas.php
+++ b/wrappers/pin_action_shas.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/pin_action_shas.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/maintenance/pin_action_shas.php
+ * BRIEF: PHP wrapper for maintenance/pin_action_shas.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'pin_action_shas';
-const SCRIPT_PATH     = 'api/maintenance/pin_action_shas.php';
+const SCRIPT_PATH     = 'maintenance/pin_action_shas.php';
 const SCRIPT_CATEGORY = 'maintenance';
 
 /**
diff --git a/wrappers/plugin_health_check.php b/wrappers/plugin_health_check.php
index 35b3006..c5f9b40 100644
--- a/wrappers/plugin_health_check.php
+++ b/wrappers/plugin_health_check.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/plugin_health_check.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/plugin_health_check.php
+ * BRIEF: PHP wrapper for plugin_health_check.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'plugin_health_check';
-const SCRIPT_PATH     = 'api/plugin_health_check.php';
+const SCRIPT_PATH     = 'plugin_health_check.php';
 const SCRIPT_CATEGORY = 'plugin';
 
 /**
diff --git a/wrappers/plugin_list.php b/wrappers/plugin_list.php
index c7b9224..cc33ed7 100644
--- a/wrappers/plugin_list.php
+++ b/wrappers/plugin_list.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/plugin_list.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/plugin_list.php
+ * BRIEF: PHP wrapper for plugin_list.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'plugin_list';
-const SCRIPT_PATH     = 'api/plugin_list.php';
+const SCRIPT_PATH     = 'plugin_list.php';
 const SCRIPT_CATEGORY = 'plugin';
 
 /**
diff --git a/wrappers/plugin_metrics.php b/wrappers/plugin_metrics.php
index c3e9f00..ddade56 100644
--- a/wrappers/plugin_metrics.php
+++ b/wrappers/plugin_metrics.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/plugin_metrics.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/plugin_metrics.php
+ * BRIEF: PHP wrapper for plugin_metrics.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'plugin_metrics';
-const SCRIPT_PATH     = 'api/plugin_metrics.php';
+const SCRIPT_PATH     = 'plugin_metrics.php';
 const SCRIPT_CATEGORY = 'plugin';
 
 /**
diff --git a/wrappers/plugin_readiness.php b/wrappers/plugin_readiness.php
index ec86d94..a1e8860 100644
--- a/wrappers/plugin_readiness.php
+++ b/wrappers/plugin_readiness.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/plugin_readiness.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/plugin_readiness.php
+ * BRIEF: PHP wrapper for plugin_readiness.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'plugin_readiness';
-const SCRIPT_PATH     = 'api/plugin_readiness.php';
+const SCRIPT_PATH     = 'plugin_readiness.php';
 const SCRIPT_CATEGORY = 'plugin';
 
 /**
diff --git a/wrappers/plugin_validate.php b/wrappers/plugin_validate.php
index 78f8b1c..4c2ed6d 100644
--- a/wrappers/plugin_validate.php
+++ b/wrappers/plugin_validate.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/plugin_validate.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/plugin_validate.php
+ * BRIEF: PHP wrapper for plugin_validate.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'plugin_validate';
-const SCRIPT_PATH     = 'api/plugin_validate.php';
+const SCRIPT_PATH     = 'plugin_validate.php';
 const SCRIPT_CATEGORY = 'plugin';
 
 /**
diff --git a/wrappers/scan_drift.php b/wrappers/scan_drift.php
index 22d01ec..8659a02 100644
--- a/wrappers/scan_drift.php
+++ b/wrappers/scan_drift.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/scan_drift.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/validate/scan_drift.php
+ * BRIEF: PHP wrapper for validate/scan_drift.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'scan_drift';
-const SCRIPT_PATH     = 'api/validate/scan_drift.php';
+const SCRIPT_PATH     = 'validate/scan_drift.php';
 const SCRIPT_CATEGORY = 'validate';
 
 /**
diff --git a/wrappers/setup_labels.php b/wrappers/setup_labels.php
index 29d165d..9a7c615 100644
--- a/wrappers/setup_labels.php
+++ b/wrappers/setup_labels.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/setup_labels.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/maintenance/setup_labels.php
+ * BRIEF: PHP wrapper for maintenance/setup_labels.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'setup_labels';
-const SCRIPT_PATH     = 'api/maintenance/setup_labels.php';
+const SCRIPT_PATH     = 'maintenance/setup_labels.php';
 const SCRIPT_CATEGORY = 'maintenance';
 
 /**
diff --git a/wrappers/sync_dolibarr_readmes.php b/wrappers/sync_dolibarr_readmes.php
index 7034d8e..6c14888 100644
--- a/wrappers/sync_dolibarr_readmes.php
+++ b/wrappers/sync_dolibarr_readmes.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/sync_dolibarr_readmes.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/maintenance/sync_dolibarr_readmes.php
+ * BRIEF: PHP wrapper for maintenance/sync_dolibarr_readmes.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'sync_dolibarr_readmes';
-const SCRIPT_PATH     = 'api/maintenance/sync_dolibarr_readmes.php';
+const SCRIPT_PATH     = 'maintenance/sync_dolibarr_readmes.php';
 const SCRIPT_CATEGORY = 'maintenance';
 
 /**
diff --git a/wrappers/update_sha_hashes.php b/wrappers/update_sha_hashes.php
index 3ccf813..09ccdfd 100644
--- a/wrappers/update_sha_hashes.php
+++ b/wrappers/update_sha_hashes.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/update_sha_hashes.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/maintenance/update_sha_hashes.php
+ * BRIEF: PHP wrapper for maintenance/update_sha_hashes.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'update_sha_hashes';
-const SCRIPT_PATH     = 'api/maintenance/update_sha_hashes.php';
+const SCRIPT_PATH     = 'maintenance/update_sha_hashes.php';
 const SCRIPT_CATEGORY = 'maintenance';
 
 /**
diff --git a/wrappers/update_version_from_readme.php b/wrappers/update_version_from_readme.php
index d9f28cf..639c45a 100644
--- a/wrappers/update_version_from_readme.php
+++ b/wrappers/update_version_from_readme.php
@@ -12,13 +12,13 @@
  * REPO: https://git.mokoconsulting.tech/MokoConsulting/MokoStandards-API
  * PATH: /wrappers/update_version_from_readme.php
  * VERSION: 04.06.00
- * BRIEF: PHP wrapper for api/maintenance/update_version_from_readme.php
+ * BRIEF: PHP wrapper for maintenance/update_version_from_readme.php
  */
 
 declare(strict_types=1);
 
 const SCRIPT_NAME     = 'update_version_from_readme';
-const SCRIPT_PATH     = 'api/maintenance/update_version_from_readme.php';
+const SCRIPT_PATH     = 'maintenance/update_version_from_readme.php';
 const SCRIPT_CATEGORY = 'maintenance';
 
 /**